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{TS}_addRetainCBoption

{ts}_correct_start_behaviour

{ts}_documentation_update

{TS}-add_filter_umi_dedup

{TS}-OutputFilteredReads

{TS}-check_bstring

{TS}-noUMIpatch

{TS}-IgnoreReadPairSuffix

{IS}_UMIClusterer_export

{TS}-UpdateKneeMethod

{IS}_refactor_UMIClusterer

{TS}-AddFAQ

{TS}-UpdatePythonTestVersion

{TS}-WhitelistFilterPosErrors

{TS}-BothPaired

{TS}-DebugGroup

{TS}-Read2Output

{TS}-EnablePerCellCountTab

{IS}_set_tags

1.1.1

1.1.0

1.0.1

1.0.0

0.5.5

0.5.4

0.5.3

0.5.2

0.5.1

0.5.0

0.4.4

0.4.3

0.4.2

0.4.1

0.4.0

0.3.6

0.3.5

0.3.4

0.3.3

0.3.2

UMI-tools
/
test_umi_tools.sh

#!/usr/bin/env bash

# set the dictionary hash 'noise'
export PYTHONHASHSEED=0

# run nosetests
if [ $TEST_STYLE ] ; then
    nosetests -v tests/test_style.py ;
elif [ $TEST_FUNCTIONALITY ] ; then
    nosetests -v tests/test_umi_tools.py ;
elif [ $TEST_HELP ] ; then
    umi_tools whitelist --help;
    umi_tools extract --help;
    umi_tools group --help;
    umi_tools dedup --help;
    umi_tools count --help;
    umi_tools count_tab --help;
fi